Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN3P26045 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPN3P26045 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN3P26045 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN3P26045 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN3P26045 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN3P26045 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN3P26045 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN3P26045 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN3P26045 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN3P26045 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN3P26045 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN3P26045 IGHV3-65-201ENST00000523210 341 ntBASIC17.25■□□□□ 0.35
PTPN3P26045 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.25■□□□□ 0.35
PTPN3P26045 AL160237.2-201ENST00000556165 472 ntBASIC17.25■□□□□ 0.35
PTPN3P26045 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN3P26045 AL049840.3-201ENST00000602669 611 ntBASIC17.25■□□□□ 0.35
PTPN3P26045 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN3P26045 AC013467.2-201ENST00000605472 835 ntBASIC17.25■□□□□ 0.35
PTPN3P26045 MIR1199-201ENST00000621445 119 ntBASIC17.25■□□□□ 0.35
PTPN3P26045 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN3P26045 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
PTPN3P26045 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN3P26045 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PTPN3P26045 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPN3P26045 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
PTPN3P26045 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPN3P26045 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PTPN3P26045 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PTPN3P26045 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN3P26045 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTPN3P26045 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPN3P26045 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PTPN3P26045 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 RPS2P28-201ENST00000314255 741 ntBASIC17.24■□□□□ 0.35
PTPN3P26045 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PTPN3P26045 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPN3P26045 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPN3P26045 AC107918.2-201ENST00000530817 355 ntBASIC17.24■□□□□ 0.35
PTPN3P26045 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN3P26045 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
PTPN3P26045 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPN3P26045 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN3P26045 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPN3P26045 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN3P26045 AL773604.1-201ENST00000617417 272 ntBASIC17.24■□□□□ 0.35
PTPN3P26045 GGTLC5P-201ENST00000617623 998 ntBASIC17.24■□□□□ 0.35
PTPN3P26045 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PTPN3P26045 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPN3P26045 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN3P26045 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN3P26045 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN3P26045 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN3P26045 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN3P26045 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTPN3P26045 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN3P26045 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN3P26045 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN3P26045 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN3P26045 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN3P26045 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN3P26045 MPDU1-223ENST00000582151 728 ntBASIC17.23■□□□□ 0.35
PTPN3P26045 MIR7706-201ENST00000613747 67 ntBASIC17.23■□□□□ 0.35
PTPN3P26045 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN3P26045 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTPN3P26045 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTPN3P26045 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN3P26045 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PTPN3P26045 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN3P26045 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN3P26045 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms