Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP2B4P23634 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP2B4P23634 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ATP2B4P23634 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2B4P23634 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP2B4P23634 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2B4P23634 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP2B4P23634 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2B4P23634 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ATP2B4P23634 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP2B4P23634 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP2B4P23634 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ATP2B4P23634 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ATP2B4P23634 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
ATP2B4P23634 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP2B4P23634 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP2B4P23634 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2B4P23634 HLA-V-204ENST00000476601 1289 ntBASIC20.33■□□□□ 0.85
ATP2B4P23634 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP2B4P23634 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.33■□□□□ 0.85
ATP2B4P23634 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP2B4P23634 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ATP2B4P23634 AC009118.2-201ENST00000613275 655 ntBASIC20.33■□□□□ 0.85
ATP2B4P23634 SPTSSB-204ENST00000617024 1292 ntBASIC20.33■□□□□ 0.85
ATP2B4P23634 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP2B4P23634 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2B4P23634 AC006277.1-201ENST00000624348 1610 ntBASIC20.33■□□□□ 0.84
ATP2B4P23634 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2B4P23634 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2B4P23634 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2B4P23634 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2B4P23634 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2B4P23634 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.33■□□□□ 0.84
ATP2B4P23634 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.33■□□□□ 0.84
ATP2B4P23634 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
ATP2B4P23634 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.33■□□□□ 0.84
ATP2B4P23634 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2B4P23634 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2B4P23634 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2B4P23634 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP2B4P23634 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.32■□□□□ 0.84
ATP2B4P23634 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ATP2B4P23634 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2B4P23634 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 FAM220BP-201ENST00000377689 816 ntBASIC20.32■□□□□ 0.84
ATP2B4P23634 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP2B4P23634 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ATP2B4P23634 CRB3P1-201ENST00000449338 276 ntBASIC20.32■□□□□ 0.84
ATP2B4P23634 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2B4P23634 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2B4P23634 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP2B4P23634 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 AL035456.1-201ENST00000456064 1369 ntBASIC20.32■□□□□ 0.84
ATP2B4P23634 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2B4P23634 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2B4P23634 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2B4P23634 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ATP2B4P23634 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2B4P23634 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2B4P23634 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2B4P23634 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2B4P23634 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2B4P23634 AC022144.1-201ENST00000602255 1580 ntBASIC20.31■□□□□ 0.84
ATP2B4P23634 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ATP2B4P23634 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2B4P23634 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2B4P23634 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2B4P23634 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2B4P23634 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP2B4P23634 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.31■□□□□ 0.84
ATP2B4P23634 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP2B4P23634 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2B4P23634 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.31■□□□□ 0.84
ATP2B4P23634 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms