Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.67■□□□□ 0.58
SMPD1P17405 AL671710.1-201ENST00000610245 2349 ntBASIC18.67■□□□□ 0.58
SMPD1P17405 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.67■□□□□ 0.58
SMPD1P17405 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.67■□□□□ 0.58
SMPD1P17405 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.67■□□□□ 0.58
SMPD1P17405 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SMPD1P17405 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SMPD1P17405 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.67■□□□□ 0.58
SMPD1P17405 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.67■□□□□ 0.58
SMPD1P17405 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMPD1P17405 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.67■□□□□ 0.58
SMPD1P17405 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.66■□□□□ 0.58
SMPD1P17405 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SMPD1P17405 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.66■□□□□ 0.58
SMPD1P17405 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SMPD1P17405 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMPD1P17405 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMPD1P17405 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.66■□□□□ 0.58
SMPD1P17405 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.66■□□□□ 0.58
SMPD1P17405 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.66■□□□□ 0.58
SMPD1P17405 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.66■□□□□ 0.58
SMPD1P17405 GAPDHP21-201ENST00000450301 1010 ntBASIC18.66■□□□□ 0.58
SMPD1P17405 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.66■□□□□ 0.58
SMPD1P17405 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.66■□□□□ 0.58
SMPD1P17405 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.66■□□□□ 0.58
SMPD1P17405 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SMPD1P17405 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SMPD1P17405 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.66■□□□□ 0.58
SMPD1P17405 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.66■□□□□ 0.58
SMPD1P17405 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.66■□□□□ 0.58
SMPD1P17405 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD1P17405 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.65■□□□□ 0.58
SMPD1P17405 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SMPD1P17405 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.65■□□□□ 0.58
SMPD1P17405 AC022144.1-201ENST00000602255 1580 ntBASIC18.65■□□□□ 0.58
SMPD1P17405 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.65■□□□□ 0.58
SMPD1P17405 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.65■□□□□ 0.58
SMPD1P17405 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.65■□□□□ 0.58
SMPD1P17405 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.65■□□□□ 0.58
SMPD1P17405 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.65■□□□□ 0.58
SMPD1P17405 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.65■□□□□ 0.58
SMPD1P17405 AC124947.2-201ENST00000547118 1133 ntBASIC18.65■□□□□ 0.58
SMPD1P17405 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.65■□□□□ 0.58
SMPD1P17405 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SMPD1P17405 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
SMPD1P17405 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.65■□□□□ 0.58
SMPD1P17405 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.65■□□□□ 0.58
SMPD1P17405 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.65■□□□□ 0.58
SMPD1P17405 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.65■□□□□ 0.58
SMPD1P17405 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD1P17405 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMPD1P17405 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 AC073439.1-201ENST00000624121 1774 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms