Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HMGN1P05114 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HMGN1P05114 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGN1P05114 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
HMGN1P05114 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.37■□□□□ 0.05
HMGN1P05114 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.37■□□□□ 0.05
HMGN1P05114 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
HMGN1P05114 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HMGN1P05114 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.37■□□□□ 0.05
HMGN1P05114 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
HMGN1P05114 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.37■□□□□ 0.05
HMGN1P05114 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
HMGN1P05114 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.37■□□□□ 0.05
HMGN1P05114 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 SIGLEC30P-201ENST00000455569 941 ntBASIC15.37■□□□□ 0.05
HMGN1P05114 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.37■□□□□ 0.05
HMGN1P05114 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
HMGN1P05114 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.37■□□□□ 0.05
HMGN1P05114 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
HMGN1P05114 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HMGN1P05114 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HMGN1P05114 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HMGN1P05114 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.37■□□□□ 0.05
HMGN1P05114 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HMGN1P05114 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGN1P05114 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HMGN1P05114 AC063926.3-201ENST00000624734 5658 ntBASIC15.36■□□□□ 0.05
HMGN1P05114 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 LINC00895-201ENST00000629028 1637 ntBASIC15.36■□□□□ 0.05
HMGN1P05114 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.36■□□□□ 0.05
HMGN1P05114 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.36■□□□□ 0.05
HMGN1P05114 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.36■□□□□ 0.05
HMGN1P05114 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.36■□□□□ 0.05
HMGN1P05114 PCDHA1-201ENST00000378133 2726 ntBASIC15.36■□□□□ 0.05
HMGN1P05114 LINC02199-201ENST00000506655 2702 ntBASIC15.36■□□□□ 0.05
HMGN1P05114 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HMGN1P05114 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HMGN1P05114 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.36■□□□□ 0.05
HMGN1P05114 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
HMGN1P05114 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.36■□□□□ 0.05
HMGN1P05114 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.36■□□□□ 0.05
HMGN1P05114 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.36■□□□□ 0.05
HMGN1P05114 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.36■□□□□ 0.05
HMGN1P05114 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.36■□□□□ 0.05
HMGN1P05114 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.36■□□□□ 0.05
HMGN1P05114 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.36■□□□□ 0.05
HMGN1P05114 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.36■□□□□ 0.05
HMGN1P05114 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HMGN1P05114 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
HMGN1P05114 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
HMGN1P05114 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.36■□□□□ 0.05
HMGN1P05114 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.36■□□□□ 0.05
HMGN1P05114 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HMGN1P05114 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGN1P05114 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.36■□□□□ 0.05
HMGN1P05114 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms