Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT6AP02538 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KRT6AP02538 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT6AP02538 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
KRT6AP02538 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT6AP02538 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT6AP02538 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT6AP02538 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT6AP02538 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT6AP02538 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT6AP02538 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT6AP02538 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT6AP02538 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT6AP02538 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
KRT6AP02538 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
KRT6AP02538 AP002414.1-201ENST00000391405 1147 ntBASIC16.44■□□□□ 0.22
KRT6AP02538 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
KRT6AP02538 AC106795.1-205ENST00000512851 1056 ntBASIC16.44■□□□□ 0.22
KRT6AP02538 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT6AP02538 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT6AP02538 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT6AP02538 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT6AP02538 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT6AP02538 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
KRT6AP02538 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.44■□□□□ 0.22
KRT6AP02538 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
KRT6AP02538 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT6AP02538 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT6AP02538 AL022326.1-202ENST00000641533 845 ntBASIC16.44■□□□□ 0.22
KRT6AP02538 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
KRT6AP02538 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
KRT6AP02538 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT6AP02538 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT6AP02538 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.44■□□□□ 0.22
KRT6AP02538 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT6AP02538 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
KRT6AP02538 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT6AP02538 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.43■□□□□ 0.22
KRT6AP02538 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT6AP02538 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT6AP02538 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT6AP02538 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT6AP02538 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT6AP02538 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT6AP02538 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT6AP02538 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
KRT6AP02538 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 RBM17P3-201ENST00000417687 1192 ntBASIC16.43■□□□□ 0.22
KRT6AP02538 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT6AP02538 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT6AP02538 FOSL1P1-201ENST00000511041 816 ntBASIC16.43■□□□□ 0.22
KRT6AP02538 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT6AP02538 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.43■□□□□ 0.22
KRT6AP02538 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
KRT6AP02538 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
KRT6AP02538 NCF1C-201ENST00000438382 1427 ntBASIC16.43■□□□□ 0.22
KRT6AP02538 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT6AP02538 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT6AP02538 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT6AP02538 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
KRT6AP02538 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT6AP02538 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT6AP02538 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms