Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.94■□□□□ 0.3
CBX6O95503 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CBX6O95503 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
CBX6O95503 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
CBX6O95503 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 TSPY22P-201ENST00000427496 604 ntBASIC16.94■□□□□ 0.3
CBX6O95503 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 HLA-F-220ENST00000434407 884 ntBASIC16.94■□□□□ 0.3
CBX6O95503 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX6O95503 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX6O95503 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 AL139327.4-201ENST00000612362 153 ntBASIC16.94■□□□□ 0.3
CBX6O95503 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
CBX6O95503 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX6O95503 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 AL136379.1-201ENST00000623471 2642 ntBASIC16.94■□□□□ 0.3
CBX6O95503 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CBX6O95503 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX6O95503 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.93■□□□□ 0.3
CBX6O95503 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX6O95503 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX6O95503 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.93■□□□□ 0.3
CBX6O95503 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.93■□□□□ 0.3
CBX6O95503 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CBX6O95503 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CBX6O95503 MIR662-201ENST00000384847 95 ntBASIC16.93■□□□□ 0.3
CBX6O95503 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.93■□□□□ 0.3
CBX6O95503 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.93■□□□□ 0.3
CBX6O95503 DRAXINP1-201ENST00000437611 948 ntBASIC16.93■□□□□ 0.3
CBX6O95503 LINC01711-201ENST00000598340 967 ntBASIC16.93■□□□□ 0.3
CBX6O95503 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX6O95503 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX6O95503 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.93■□□□□ 0.3
CBX6O95503 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CBX6O95503 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX6O95503 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 BX276092.7-203ENST00000637198 1536 ntBASIC16.92■□□□□ 0.3
CBX6O95503 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.92■□□□□ 0.3
CBX6O95503 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.92■□□□□ 0.3
CBX6O95503 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CBX6O95503 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CBX6O95503 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.92■□□□□ 0.3
CBX6O95503 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 AC079781.3-201ENST00000449110 356 ntBASIC16.92■□□□□ 0.3
CBX6O95503 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 AP000867.3-201ENST00000524675 377 ntBASIC16.92■□□□□ 0.3
CBX6O95503 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.92■□□□□ 0.3
CBX6O95503 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.92■□□□□ 0.3
CBX6O95503 TPSP2-201ENST00000561760 610 ntBASIC16.92■□□□□ 0.3
CBX6O95503 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.92■□□□□ 0.3
CBX6O95503 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CBX6O95503 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.92■□□□□ 0.3
CBX6O95503 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CBX6O95503 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms