Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST1O76090 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
BEST1O76090 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BEST1O76090 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST1O76090 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.7■□□□□ 0.42
BEST1O76090 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.7■□□□□ 0.42
BEST1O76090 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BEST1O76090 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST1O76090 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
BEST1O76090 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.69■□□□□ 0.42
BEST1O76090 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.69■□□□□ 0.42
BEST1O76090 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
BEST1O76090 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
BEST1O76090 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST1O76090 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST1O76090 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.69■□□□□ 0.42
BEST1O76090 CEND1P1-201ENST00000451006 455 ntBASIC17.69■□□□□ 0.42
BEST1O76090 AL009183.1-201ENST00000603760 355 ntBASIC17.69■□□□□ 0.42
BEST1O76090 AC013467.2-201ENST00000605472 835 ntBASIC17.69■□□□□ 0.42
BEST1O76090 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 AL691403.2-201ENST00000618460 490 ntBASIC17.69■□□□□ 0.42
BEST1O76090 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
BEST1O76090 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
BEST1O76090 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
BEST1O76090 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
BEST1O76090 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST1O76090 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
BEST1O76090 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
BEST1O76090 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
BEST1O76090 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST1O76090 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BEST1O76090 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 AC106886.4-201ENST00000623557 2502 ntBASIC17.68■□□□□ 0.42
BEST1O76090 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST1O76090 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.68■□□□□ 0.42
BEST1O76090 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BEST1O76090 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST1O76090 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.68■□□□□ 0.42
BEST1O76090 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
BEST1O76090 AC078925.2-201ENST00000624013 1973 ntBASIC17.68■□□□□ 0.42
BEST1O76090 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST1O76090 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST1O76090 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 AC211486.1-202ENST00000416371 468 ntBASIC17.68■□□□□ 0.42
BEST1O76090 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
BEST1O76090 RPS8P6-201ENST00000426177 609 ntBASIC17.68■□□□□ 0.42
BEST1O76090 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST1O76090 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.68■□□□□ 0.42
BEST1O76090 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST1O76090 AC211476.1-201ENST00000503899 468 ntBASIC17.68■□□□□ 0.42
BEST1O76090 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.68■□□□□ 0.42
BEST1O76090 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST1O76090 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
BEST1O76090 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
BEST1O76090 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.68■□□□□ 0.42
BEST1O76090 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST1O76090 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.68■□□□□ 0.42
BEST1O76090 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BEST1O76090 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
BEST1O76090 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms