Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN11O75508 AC109635.5-201ENST00000533593 962 ntBASIC17.23■□□□□ 0.35
CLDN11O75508 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CLDN11O75508 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.23■□□□□ 0.35
CLDN11O75508 U1.21-201ENST00000580816 167 ntBASIC17.23■□□□□ 0.35
CLDN11O75508 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN11O75508 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN11O75508 AC006538.3-201ENST00000612495 578 ntBASIC17.23■□□□□ 0.35
CLDN11O75508 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLDN11O75508 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN11O75508 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN11O75508 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.23■□□□□ 0.35
CLDN11O75508 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN11O75508 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLDN11O75508 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN11O75508 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLDN11O75508 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
CLDN11O75508 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CLDN11O75508 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN11O75508 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 PMS2P4-201ENST00000412466 1052 ntBASIC17.22■□□□□ 0.35
CLDN11O75508 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN11O75508 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN11O75508 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN11O75508 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLDN11O75508 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN11O75508 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN11O75508 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN11O75508 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN11O75508 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
CLDN11O75508 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN11O75508 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN11O75508 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.22■□□□□ 0.35
CLDN11O75508 AL009183.1-201ENST00000603760 355 ntBASIC17.22■□□□□ 0.35
CLDN11O75508 AL031055.1-201ENST00000606362 631 ntBASIC17.22■□□□□ 0.35
CLDN11O75508 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN11O75508 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN11O75508 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN11O75508 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN11O75508 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN11O75508 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 AL391256.1-201ENST00000443260 1855 ntBASIC17.22■□□□□ 0.35
CLDN11O75508 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN11O75508 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN11O75508 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN11O75508 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN11O75508 ELL2P1-201ENST00000413990 1906 ntBASIC17.21■□□□□ 0.35
CLDN11O75508 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.21■□□□□ 0.35
CLDN11O75508 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CLDN11O75508 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN11O75508 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN11O75508 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN11O75508 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN11O75508 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN11O75508 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN11O75508 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
CLDN11O75508 GPALPP1-207ENST00000611650 899 ntBASIC17.21■□□□□ 0.35
CLDN11O75508 AC139530.3-201ENST00000620344 690 ntBASIC17.21■□□□□ 0.35
CLDN11O75508 AC092902.6-201ENST00000641783 218 ntBASIC17.21■□□□□ 0.35
CLDN11O75508 AL139011.1-202ENST00000642063 584 ntBASIC17.21■□□□□ 0.35
CLDN11O75508 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN11O75508 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN11O75508 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN11O75508 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN11O75508 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN11O75508 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLDN11O75508 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms