Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GZMB-202ENST00000382540 816 ntTSL 5 BASIC7.43□□□□□ -1.22
USH2AO75445 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC7.43□□□□□ -1.22
USH2AO75445 BX284668.4-201ENST00000453917 508 ntBASIC7.43□□□□□ -1.22
USH2AO75445 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC7.43□□□□□ -1.22
USH2AO75445 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC7.43□□□□□ -1.22
USH2AO75445 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC7.43□□□□□ -1.22
USH2AO75445 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC7.43□□□□□ -1.22
USH2AO75445 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC7.43□□□□□ -1.22
USH2AO75445 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC7.43□□□□□ -1.22
USH2AO75445 KC6-205ENST00000599934 556 ntTSL 4 BASIC7.43□□□□□ -1.22
USH2AO75445 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
USH2AO75445 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC7.43□□□□□ -1.22
USH2AO75445 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC7.43□□□□□ -1.22
USH2AO75445 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
USH2AO75445 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 AC018735.1-201ENST00000437208 1502 ntBASIC7.43□□□□□ -1.22
USH2AO75445 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 AC026954.1-201ENST00000429771 1293 ntBASIC7.43□□□□□ -1.22
USH2AO75445 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 RN7SL720P-201ENST00000488178 304 ntBASIC7.43□□□□□ -1.22
USH2AO75445 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
USH2AO75445 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
USH2AO75445 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
USH2AO75445 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC7.43□□□□□ -1.22
USH2AO75445 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC7.43□□□□□ -1.22
USH2AO75445 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 AL008638.5-201ENST00000623814 1298 ntBASIC7.43□□□□□ -1.22
USH2AO75445 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 AMT-232ENST00000636199 1546 ntTSL 5 BASIC7.42□□□□□ -1.22
USH2AO75445 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 MSTO2P-201ENST00000314835 1709 ntBASIC7.42□□□□□ -1.22
USH2AO75445 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC7.42□□□□□ -1.22
USH2AO75445 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
USH2AO75445 UPF3AP2-201ENST00000457924 1132 ntBASIC7.42□□□□□ -1.22
USH2AO75445 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
USH2AO75445 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC7.42□□□□□ -1.22
USH2AO75445 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
USH2AO75445 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
USH2AO75445 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 SERF2-206ENST00000409291 807 ntTSL 3 BASIC7.42□□□□□ -1.22
USH2AO75445 EIF4HP1-201ENST00000453115 687 ntBASIC7.42□□□□□ -1.22
USH2AO75445 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 AL136301.1-201ENST00000615830 422 ntBASIC7.42□□□□□ -1.22
USH2AO75445 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
USH2AO75445 AC148477.9-201ENST00000623974 539 ntBASIC7.42□□□□□ -1.22
USH2AO75445 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC7.42□□□□□ -1.22
USH2AO75445 AC138028.6-201ENST00000616106 1482 ntBASIC7.42□□□□□ -1.22
USH2AO75445 AC106820.2-201ENST00000563775 3264 ntBASIC7.42□□□□□ -1.22
USH2AO75445 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC7.42□□□□□ -1.22
USH2AO75445 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms