Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CPNE3O75131 AP006288.1-201ENST00000446065 395 ntBASIC16.3■□□□□ 0.2
CPNE3O75131 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 ALG1L5P-201ENST00000482043 771 ntBASIC16.3■□□□□ 0.2
CPNE3O75131 YBX1P5-201ENST00000509441 847 ntBASIC16.3■□□□□ 0.2
CPNE3O75131 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.3■□□□□ 0.2
CPNE3O75131 AC004877.2-201ENST00000623941 599 ntBASIC16.3■□□□□ 0.2
CPNE3O75131 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.3■□□□□ 0.2
CPNE3O75131 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CPNE3O75131 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CPNE3O75131 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 AC012317.2-201ENST00000623305 2251 ntBASIC16.3■□□□□ 0.2
CPNE3O75131 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.3■□□□□ 0.2
CPNE3O75131 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE3O75131 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE3O75131 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE3O75131 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE3O75131 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE3O75131 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CPNE3O75131 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.29■□□□□ 0.2
CPNE3O75131 MKNK2P1-201ENST00000437526 628 ntBASIC16.29■□□□□ 0.2
CPNE3O75131 RHOQP3-201ENST00000437982 621 ntBASIC16.29■□□□□ 0.2
CPNE3O75131 DNAJB3-202ENST00000449667 1266 ntBASIC16.29■□□□□ 0.2
CPNE3O75131 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.29■□□□□ 0.2
CPNE3O75131 CXCL1P1-201ENST00000502804 216 ntBASIC16.29■□□□□ 0.2
CPNE3O75131 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE3O75131 KRT19P2-202ENST00000557173 1012 ntBASIC16.29■□□□□ 0.2
CPNE3O75131 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE3O75131 AC023141.13-201ENST00000604991 943 ntBASIC16.29■□□□□ 0.2
CPNE3O75131 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE3O75131 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CPNE3O75131 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE3O75131 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CPNE3O75131 AD000864.1-201ENST00000624076 2295 ntBASIC16.29■□□□□ 0.2
CPNE3O75131 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE3O75131 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE3O75131 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE3O75131 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE3O75131 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE3O75131 AL513477.1-201ENST00000602865 2407 ntBASIC16.28■□□□□ 0.2
CPNE3O75131 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE3O75131 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CPNE3O75131 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE3O75131 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE3O75131 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE3O75131 HTR5BP-201ENST00000430851 1154 ntBASIC16.28■□□□□ 0.2
CPNE3O75131 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE3O75131 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE3O75131 MIR4469-201ENST00000583919 79 ntBASIC16.28■□□□□ 0.2
CPNE3O75131 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE3O75131 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE3O75131 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.28■□□□□ 0.2
CPNE3O75131 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE3O75131 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE3O75131 AL078644.1-201ENST00000609881 752 ntBASIC16.28■□□□□ 0.2
CPNE3O75131 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE3O75131 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE3O75131 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE3O75131 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE3O75131 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE3O75131 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE3O75131 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE3O75131 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE3O75131 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE3O75131 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms