Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 COX5BP2-201ENST00000392354 334 ntBASIC16.35■□□□□ 0.21
SLC28A2O43868 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SLC28A2O43868 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC28A2O43868 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC28A2O43868 AC002558.1-201ENST00000488906 803 ntBASIC16.35■□□□□ 0.21
SLC28A2O43868 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.35■□□□□ 0.21
SLC28A2O43868 AC004449.1-201ENST00000564240 433 ntBASIC16.35■□□□□ 0.21
SLC28A2O43868 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SLC28A2O43868 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
SLC28A2O43868 AL513190.1-201ENST00000621254 727 ntBASIC16.35■□□□□ 0.21
SLC28A2O43868 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SLC28A2O43868 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC28A2O43868 PGM5P2-202ENST00000637225 1043 ntBASIC16.35■□□□□ 0.21
SLC28A2O43868 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SLC28A2O43868 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SLC28A2O43868 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC28A2O43868 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
SLC28A2O43868 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC28A2O43868 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC28A2O43868 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC28A2O43868 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC28A2O43868 ELL2P1-201ENST00000413990 1906 ntBASIC16.35■□□□□ 0.21
SLC28A2O43868 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SLC28A2O43868 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC28A2O43868 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC28A2O43868 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC28A2O43868 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC28A2O43868 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC28A2O43868 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC28A2O43868 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC28A2O43868 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SLC28A2O43868 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SLC28A2O43868 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC28A2O43868 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC28A2O43868 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.34■□□□□ 0.21
SLC28A2O43868 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC28A2O43868 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC28A2O43868 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC28A2O43868 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC28A2O43868 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC28A2O43868 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC28A2O43868 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC28A2O43868 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.34■□□□□ 0.21
SLC28A2O43868 AF228730.6-201ENST00000641497 218 ntBASIC16.34■□□□□ 0.21
SLC28A2O43868 AC084121.3-201ENST00000641716 218 ntBASIC16.34■□□□□ 0.21
SLC28A2O43868 AC105233.6-201ENST00000642093 218 ntBASIC16.34■□□□□ 0.21
SLC28A2O43868 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SLC28A2O43868 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SLC28A2O43868 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC28A2O43868 AC099398.1-201ENST00000567919 2776 ntBASIC16.34■□□□□ 0.21
SLC28A2O43868 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC28A2O43868 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A2O43868 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SLC28A2O43868 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A2O43868 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A2O43868 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A2O43868 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A2O43868 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A2O43868 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC28A2O43868 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A2O43868 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A2O43868 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A2O43868 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
SLC28A2O43868 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A2O43868 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLC28A2O43868 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A2O43868 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC28A2O43868 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC28A2O43868 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SLC28A2O43868 MKNK2P1-201ENST00000437526 628 ntBASIC16.33■□□□□ 0.2
SLC28A2O43868 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A2O43868 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC28A2O43868 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC28A2O43868 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A2O43868 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC28A2O43868 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC28A2O43868 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC28A2O43868 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC28A2O43868 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A2O43868 AC027612.4-201ENST00000605371 583 ntBASIC16.33■□□□□ 0.2
SLC28A2O43868 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A2O43868 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SLC28A2O43868 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms