Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRGAP3O43295 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SRGAP3O43295 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.95■□□□□ 0.94
SRGAP3O43295 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRGAP3O43295 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SRGAP3O43295 AL391256.1-201ENST00000443260 1855 ntBASIC20.95■□□□□ 0.94
SRGAP3O43295 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SRGAP3O43295 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRGAP3O43295 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRGAP3O43295 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.95■□□□□ 0.94
SRGAP3O43295 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SRGAP3O43295 BX842568.4-201ENST00000421222 227 ntBASIC20.95■□□□□ 0.94
SRGAP3O43295 MCCD1P2-201ENST00000423228 335 ntBASIC20.95■□□□□ 0.94
SRGAP3O43295 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRGAP3O43295 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.95■□□□□ 0.94
SRGAP3O43295 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRGAP3O43295 LINC00895-201ENST00000629028 1637 ntBASIC20.95■□□□□ 0.94
SRGAP3O43295 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.95■□□□□ 0.94
SRGAP3O43295 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRGAP3O43295 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.95■□□□□ 0.94
SRGAP3O43295 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRGAP3O43295 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRGAP3O43295 AC106886.4-201ENST00000623557 2502 ntBASIC20.95■□□□□ 0.94
SRGAP3O43295 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.94■□□□□ 0.94
SRGAP3O43295 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
SRGAP3O43295 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SRGAP3O43295 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.94■□□□□ 0.94
SRGAP3O43295 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.94■□□□□ 0.94
SRGAP3O43295 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
SRGAP3O43295 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SRGAP3O43295 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SRGAP3O43295 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.94■□□□□ 0.94
SRGAP3O43295 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.94■□□□□ 0.94
SRGAP3O43295 CYP2A7P1-201ENST00000595391 815 ntBASIC20.94■□□□□ 0.94
SRGAP3O43295 AC013467.2-201ENST00000605472 835 ntBASIC20.94■□□□□ 0.94
SRGAP3O43295 AC023511.2-201ENST00000618803 211 ntBASIC20.94■□□□□ 0.94
SRGAP3O43295 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SRGAP3O43295 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.94■□□□□ 0.94
SRGAP3O43295 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.94■□□□□ 0.94
SRGAP3O43295 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SRGAP3O43295 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRGAP3O43295 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.93■□□□□ 0.94
SRGAP3O43295 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.93■□□□□ 0.94
SRGAP3O43295 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
SRGAP3O43295 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SRGAP3O43295 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SRGAP3O43295 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.93■□□□□ 0.94
SRGAP3O43295 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SRGAP3O43295 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
SRGAP3O43295 AC092865.5-201ENST00000545435 363 ntBASIC20.93■□□□□ 0.94
SRGAP3O43295 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.93■□□□□ 0.94
SRGAP3O43295 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.93■□□□□ 0.94
SRGAP3O43295 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
SRGAP3O43295 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SRGAP3O43295 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.93■□□□□ 0.94
SRGAP3O43295 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.93■□□□□ 0.94
SRGAP3O43295 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SRGAP3O43295 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.93■□□□□ 0.94
SRGAP3O43295 AL671710.1-201ENST00000610245 2349 ntBASIC20.93■□□□□ 0.94
SRGAP3O43295 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.93■□□□□ 0.94
SRGAP3O43295 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms