Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
SEMA3EO15041 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.25■□□□□ 0.83
SEMA3EO15041 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.25■□□□□ 0.83
SEMA3EO15041 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.25■□□□□ 0.83
SEMA3EO15041 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
SEMA3EO15041 RBPMS2P1-201ENST00000437762 623 ntBASIC20.25■□□□□ 0.83
SEMA3EO15041 AC069262.1-201ENST00000539058 672 ntBASIC20.25■□□□□ 0.83
SEMA3EO15041 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.25■□□□□ 0.83
SEMA3EO15041 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.25■□□□□ 0.83
SEMA3EO15041 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.25■□□□□ 0.83
SEMA3EO15041 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 Z92544.3-201ENST00000624747 417 ntBASIC20.25■□□□□ 0.83
SEMA3EO15041 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 AL139011.1-202ENST00000642063 584 ntBASIC20.25■□□□□ 0.83
SEMA3EO15041 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SEMA3EO15041 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.25■□□□□ 0.83
SEMA3EO15041 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.25■□□□□ 0.83
SEMA3EO15041 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SEMA3EO15041 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SEMA3EO15041 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SEMA3EO15041 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.24■□□□□ 0.83
SEMA3EO15041 AC092068.3-201ENST00000587894 2016 ntBASIC20.24■□□□□ 0.83
SEMA3EO15041 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SEMA3EO15041 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
SEMA3EO15041 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SEMA3EO15041 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SEMA3EO15041 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.24■□□□□ 0.83
SEMA3EO15041 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SEMA3EO15041 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.24■□□□□ 0.83
SEMA3EO15041 SLC25A39P2-201ENST00000537614 270 ntBASIC20.24■□□□□ 0.83
SEMA3EO15041 AC073389.1-201ENST00000595595 795 ntBASIC20.24■□□□□ 0.83
SEMA3EO15041 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.24■□□□□ 0.83
SEMA3EO15041 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.24■□□□□ 0.83
SEMA3EO15041 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.24■□□□□ 0.83
SEMA3EO15041 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SEMA3EO15041 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA3EO15041 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.24■□□□□ 0.83
SEMA3EO15041 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.24■□□□□ 0.83
SEMA3EO15041 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
SEMA3EO15041 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SEMA3EO15041 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SEMA3EO15041 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.23■□□□□ 0.83
SEMA3EO15041 MIR770-201ENST00000390219 98 ntBASIC20.23■□□□□ 0.83
SEMA3EO15041 KRT8P39-201ENST00000396270 1433 ntBASIC20.23■□□□□ 0.83
SEMA3EO15041 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.23■□□□□ 0.83
SEMA3EO15041 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 SPDYE14P-201ENST00000442619 822 ntBASIC20.23■□□□□ 0.83
SEMA3EO15041 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.23■□□□□ 0.83
SEMA3EO15041 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.23■□□□□ 0.83
SEMA3EO15041 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.23■□□□□ 0.83
SEMA3EO15041 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.23■□□□□ 0.83
SEMA3EO15041 AC026150.2-201ENST00000564693 1156 ntBASIC20.23■□□□□ 0.83
SEMA3EO15041 AC051619.7-201ENST00000568314 623 ntBASIC20.23■□□□□ 0.83
SEMA3EO15041 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.23■□□□□ 0.83
SEMA3EO15041 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.23■□□□□ 0.83
SEMA3EO15041 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.23■□□□□ 0.83
SEMA3EO15041 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.23■□□□□ 0.83
SEMA3EO15041 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms