Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
UPK1AO00322 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.06■□□□□ 0.16
UPK1AO00322 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.06■□□□□ 0.16
UPK1AO00322 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.06■□□□□ 0.16
UPK1AO00322 HLA-A-202ENST00000376806 1854 ntBASIC16.06■□□□□ 0.16
UPK1AO00322 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.06■□□□□ 0.16
UPK1AO00322 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 FRMD8P1-201ENST00000440433 1524 ntBASIC16.06■□□□□ 0.16
UPK1AO00322 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UPK1AO00322 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UPK1AO00322 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.06■□□□□ 0.16
UPK1AO00322 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.06■□□□□ 0.16
UPK1AO00322 SAPCD2P3-201ENST00000455031 850 ntBASIC16.06■□□□□ 0.16
UPK1AO00322 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.06■□□□□ 0.16
UPK1AO00322 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.06■□□□□ 0.16
UPK1AO00322 SART3-203ENST00000546611 1184 ntBASIC16.06■□□□□ 0.16
UPK1AO00322 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.06■□□□□ 0.16
UPK1AO00322 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.06■□□□□ 0.16
UPK1AO00322 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.06■□□□□ 0.16
UPK1AO00322 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.06■□□□□ 0.16
UPK1AO00322 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.06■□□□□ 0.16
UPK1AO00322 AC064862.7-201ENST00000604520 867 ntBASIC16.06■□□□□ 0.16
UPK1AO00322 IFNL4P1-201ENST00000607083 540 ntBASIC16.06■□□□□ 0.16
UPK1AO00322 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
UPK1AO00322 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UPK1AO00322 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
UPK1AO00322 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.06■□□□□ 0.16
UPK1AO00322 AL365203.3-201ENST00000609742 2057 ntBASIC16.06■□□□□ 0.16
UPK1AO00322 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1AO00322 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.06■□□□□ 0.16
UPK1AO00322 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
UPK1AO00322 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.05■□□□□ 0.16
UPK1AO00322 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.05■□□□□ 0.16
UPK1AO00322 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 UNC93B7-201ENST00000509439 705 ntBASIC16.05■□□□□ 0.16
UPK1AO00322 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
UPK1AO00322 AF238378.1-201ENST00000526806 358 ntBASIC16.05■□□□□ 0.16
UPK1AO00322 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.05■□□□□ 0.16
UPK1AO00322 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.05■□□□□ 0.16
UPK1AO00322 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
UPK1AO00322 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.05■□□□□ 0.16
UPK1AO00322 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1AO00322 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1AO00322 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.04■□□□□ 0.16
UPK1AO00322 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1AO00322 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1AO00322 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.04■□□□□ 0.16
UPK1AO00322 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1AO00322 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
UPK1AO00322 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1AO00322 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1AO00322 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.04■□□□□ 0.16
UPK1AO00322 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1AO00322 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
UPK1AO00322 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1AO00322 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
UPK1AO00322 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.04■□□□□ 0.16
UPK1AO00322 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1AO00322 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.04■□□□□ 0.16
UPK1AO00322 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.04■□□□□ 0.16
UPK1AO00322 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.04■□□□□ 0.16
UPK1AO00322 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms