Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SDHAP2-201ENST00000455183 2001 ntBASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SSR4P1-203ENST00000599569 2260 ntBASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MIR663A-201ENST00000385250 93 ntBASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC093787.1-201ENST00000450396 207 ntBASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC133552.2-202ENST00000575694 574 ntBASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ME2P1-201ENST00000426028 1970 ntBASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC026185.1-201ENST00000445748 174 ntBASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC027612.1-201ENST00000445234 2395 ntBASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 RCC2P3-201ENST00000418112 1537 ntBASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LSM12P1-201ENST00000411836 588 ntBASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms