Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.44□□□□□ -0.42
NACAE9PAV3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.44□□□□□ -0.42
NACAE9PAV3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.44□□□□□ -0.42
NACAE9PAV3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 AC005332.3-201ENST00000589904 676 ntBASIC12.44□□□□□ -0.42
NACAE9PAV3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 AC097374.2-201ENST00000618617 1306 ntBASIC12.44□□□□□ -0.42
NACAE9PAV3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NACAE9PAV3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 SAPCD2P3-201ENST00000455031 850 ntBASIC12.44□□□□□ -0.42
NACAE9PAV3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.44□□□□□ -0.42
NACAE9PAV3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NACAE9PAV3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.44□□□□□ -0.42
NACAE9PAV3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.44□□□□□ -0.42
NACAE9PAV3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NACAE9PAV3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
NACAE9PAV3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.43□□□□□ -0.42
NACAE9PAV3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.43□□□□□ -0.42
NACAE9PAV3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.43□□□□□ -0.42
NACAE9PAV3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.43□□□□□ -0.42
NACAE9PAV3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NACAE9PAV3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NACAE9PAV3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NACAE9PAV3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.43□□□□□ -0.42
NACAE9PAV3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.43□□□□□ -0.42
NACAE9PAV3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.43□□□□□ -0.42
NACAE9PAV3 RNA5SP419-201ENST00000515908 135 ntBASIC12.43□□□□□ -0.42
NACAE9PAV3 AF238378.1-201ENST00000526806 358 ntBASIC12.43□□□□□ -0.42
NACAE9PAV3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.43□□□□□ -0.42
NACAE9PAV3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.43□□□□□ -0.42
NACAE9PAV3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.43□□□□□ -0.42
NACAE9PAV3 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms