Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 FAM8A6P-201ENST00000407496 1135 ntBASIC14.78□□□□□ -0.04
SHISA3A0PJX4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 OR6D1P-203ENST00000641209 4860 ntBASIC14.78□□□□□ -0.04
SHISA3A0PJX4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 AP005117.1-202ENST00000581724 1908 ntBASIC14.78□□□□□ -0.04
SHISA3A0PJX4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 GGT4P-201ENST00000623672 1708 ntBASIC14.78□□□□□ -0.04
SHISA3A0PJX4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 GGT3P-204ENST00000453783 1664 ntBASIC14.77□□□□□ -0.04
SHISA3A0PJX4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHISA3A0PJX4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 Z83836.1-201ENST00000624605 1642 ntBASIC14.77□□□□□ -0.05
SHISA3A0PJX4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHISA3A0PJX4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 KRT17P2-201ENST00000300992 1314 ntBASIC14.76□□□□□ -0.05
SHISA3A0PJX4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 AC022532.1-201ENST00000624563 1728 ntBASIC14.76□□□□□ -0.05
SHISA3A0PJX4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 AL845331.1-201ENST00000424978 1190 ntBASIC14.76□□□□□ -0.05
SHISA3A0PJX4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 SLC25A3P1-201ENST00000443844 931 ntBASIC14.76□□□□□ -0.05
SHISA3A0PJX4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 VENTXP5-201ENST00000523979 775 ntBASIC14.76□□□□□ -0.05
SHISA3A0PJX4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 AC140113.3-201ENST00000605663 199 ntBASIC14.76□□□□□ -0.05
SHISA3A0PJX4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms