Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 AC005052.1-201ENST00000625181 2492 ntBASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV5A0A0B4J249 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 TERF1P1-201ENST00000311003 1181 ntBASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 AC073912.3-201ENST00000624414 853 ntBASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 AL353593.2-201ENST00000602529 1483 ntBASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV5A0A0B4J249 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 AC132938.5-201ENST00000624980 1813 ntBASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 RNF152P1-201ENST00000397754 604 ntBASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 AC113347.1-201ENST00000413321 391 ntBASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 AL845331.1-201ENST00000424978 1190 ntBASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 SPDYE13P-201ENST00000445314 798 ntBASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 HOMER2P1-201ENST00000455653 964 ntBASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 RN7SL606P-201ENST00000472779 293 ntBASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms