Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 CRB3P1-201ENST00000449338 276 ntBASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 AC131009.4-201ENST00000624048 1740 ntBASIC15.97■□□□□ 0.15
CCDC187A0A096LP49 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 SLC25A6P5-201ENST00000435663 894 ntBASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 AC004890.2-204ENST00000481968 304 ntBASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 AC027369.6-201ENST00000525520 931 ntBASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 AC021097.1-201ENST00000607902 574 ntBASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 AC009118.2-201ENST00000613275 655 ntBASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 LTB4R2-202ENST00000528054 3092 ntBASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CCDC187A0A096LP49 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CCDC187A0A096LP49 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC187A0A096LP49 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC187A0A096LP49 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC187A0A096LP49 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 AC105233.2-201ENST00000523697 349 ntBASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 AF228730.5-201ENST00000530288 346 ntBASIC15.95■□□□□ 0.14
CCDC187A0A096LP49 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms