Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 AC107918.2-201ENST00000530817 355 ntBASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 AC129492.6-201ENST00000611383 1305 ntBASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 KRT8P49-201ENST00000604166 1432 ntBASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 AC040169.1-201ENST00000565382 521 ntBASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 AC092364.2-202ENST00000597012 1073 ntBASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 AC005915.1-201ENST00000624912 2018 ntBASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 TOP3BP1-201ENST00000420768 1380 ntBASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI2Q9Y5P3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 PCDHB17P-201ENST00000539533 2393 ntBASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 AL121761.2-201ENST00000598007 1648 ntBASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 HCG4B-203ENST00000450128 991 ntBASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 AC105020.1-201ENST00000435356 2205 ntBASIC17.11■□□□□ 0.33
RAI2Q9Y5P3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms