Protein–RNA interactions for Protein: Q9Y287

ITM2B, Integral membrane protein 2B, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2BQ9Y287 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 RHOQP3-201ENST00000437982 621 ntBASIC17.09■□□□□ 0.33
ITM2BQ9Y287 DNAJB3-201ENST00000446806 729 ntBASIC17.09■□□□□ 0.33
ITM2BQ9Y287 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 AC107918.2-201ENST00000530817 355 ntBASIC17.09■□□□□ 0.33
ITM2BQ9Y287 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 AL078644.1-201ENST00000609881 752 ntBASIC17.09■□□□□ 0.33
ITM2BQ9Y287 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 AC016396.2-201ENST00000562575 1417 ntBASIC17.09■□□□□ 0.33
ITM2BQ9Y287 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 AC099398.1-201ENST00000567919 2776 ntBASIC17.09■□□□□ 0.33
ITM2BQ9Y287 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ITM2BQ9Y287 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ITM2BQ9Y287 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 AL691403.2-201ENST00000618460 490 ntBASIC17.08■□□□□ 0.32
ITM2BQ9Y287 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 AC141586.5-201ENST00000624546 2050 ntBASIC17.08■□□□□ 0.32
ITM2BQ9Y287 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITM2BQ9Y287 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 MCCD1P2-201ENST00000423228 335 ntBASIC17.07■□□□□ 0.32
ITM2BQ9Y287 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 FAM185BP-201ENST00000443595 716 ntBASIC17.07■□□□□ 0.32
ITM2BQ9Y287 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ITM2BQ9Y287 PDPK2P-202ENST00000562415 1191 ntBASIC17.07■□□□□ 0.32
ITM2BQ9Y287 MIR3687-2-201ENST00000577708 61 ntBASIC17.07■□□□□ 0.32
ITM2BQ9Y287 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms