Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 INE1-201ENST00000456273 945 ntBASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 AC093004.1-201ENST00000508850 424 ntBASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 AC004790.1-201ENST00000612686 536 ntBASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC52A1Q9NWF4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 AP006294.1-201ENST00000415407 339 ntBASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 AL512361.1-201ENST00000554200 418 ntBASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 AC106886.1-201ENST00000568660 600 ntBASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SLC52A1Q9NWF4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 AC079776.1-201ENST00000401540 1152 ntBASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 RN7SL618P-201ENST00000477850 296 ntBASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 HILS1-202ENST00000545329 423 ntBASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
SLC52A1Q9NWF4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 AL671710.1-201ENST00000610245 2349 ntBASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 AL512384.1-201ENST00000406683 331 ntBASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 AC114501.2-201ENST00000439631 535 ntBASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 DOC2GP-202ENST00000514950 1163 ntBASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 CHCHD2P3-201ENST00000603038 451 ntBASIC23.9■■□□□ 1.42
SLC52A1Q9NWF4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms