Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.84■□□□□ 0.13
RLIMQ9NVW2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.84■□□□□ 0.13
RLIMQ9NVW2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RLIMQ9NVW2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
RLIMQ9NVW2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RLIMQ9NVW2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RLIMQ9NVW2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RLIMQ9NVW2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RLIMQ9NVW2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
RLIMQ9NVW2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
RLIMQ9NVW2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RLIMQ9NVW2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 NUS1P1-201ENST00000446295 882 ntBASIC15.83■□□□□ 0.12
RLIMQ9NVW2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 AC132008.2-207ENST00000454517 770 ntBASIC15.83■□□□□ 0.12
RLIMQ9NVW2 FOSL1P1-201ENST00000511041 816 ntBASIC15.83■□□□□ 0.12
RLIMQ9NVW2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.83■□□□□ 0.12
RLIMQ9NVW2 CYP2T1P-202ENST00000641596 2535 ntBASIC15.83■□□□□ 0.12
RLIMQ9NVW2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 AC097637.2-201ENST00000624096 1997 ntBASIC15.82■□□□□ 0.12
RLIMQ9NVW2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RLIMQ9NVW2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 KRT16P4-201ENST00000453883 522 ntBASIC15.81■□□□□ 0.12
RLIMQ9NVW2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms