Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SCAF1Q9H7N4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SCAF1Q9H7N4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SCAF1Q9H7N4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC25.4■■□□□ 1.66
SCAF1Q9H7N4 AC106886.4-201ENST00000623557 2502 ntBASIC25.4■■□□□ 1.66
SCAF1Q9H7N4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SCAF1Q9H7N4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC25.4■■□□□ 1.66
SCAF1Q9H7N4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SCAF1Q9H7N4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
SCAF1Q9H7N4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SCAF1Q9H7N4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 LAGE3P1-201ENST00000425356 484 ntBASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 MKNK2P1-201ENST00000437526 628 ntBASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 AC018845.2-201ENST00000568326 409 ntBASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 Z92544.3-201ENST00000624747 417 ntBASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCAF1Q9H7N4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
SCAF1Q9H7N4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
SCAF1Q9H7N4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
SCAF1Q9H7N4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCAF1Q9H7N4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCAF1Q9H7N4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC25.39■■□□□ 1.65
SCAF1Q9H7N4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SCAF1Q9H7N4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SCAF1Q9H7N4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCAF1Q9H7N4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 CCDC74BP1-201ENST00000508880 1123 ntBASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 ACTG1P22-201ENST00000603793 1099 ntBASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 LINC02228-204ENST00000642115 2962 ntBASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF1Q9H7N4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 HLA-DRB6-201ENST00000411500 1235 ntBASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
SCAF1Q9H7N4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms