Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 GPR89P-201ENST00000407924 1495 ntBASIC15.73■□□□□ 0.11
UBQLN3Q9H347 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 UNC93B6-202ENST00000528242 690 ntBASIC15.73■□□□□ 0.11
UBQLN3Q9H347 AC034105.1-201ENST00000563488 319 ntBASIC15.73■□□□□ 0.11
UBQLN3Q9H347 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 AC104109.2-201ENST00000602919 1418 ntBASIC15.73■□□□□ 0.11
UBQLN3Q9H347 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 ZNF259P1-201ENST00000407656 1365 ntBASIC15.73■□□□□ 0.11
UBQLN3Q9H347 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
UBQLN3Q9H347 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 AC005593.1-201ENST00000624894 515 ntBASIC15.72■□□□□ 0.11
UBQLN3Q9H347 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.72■□□□□ 0.11
UBQLN3Q9H347 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 AC009947.1-201ENST00000444350 727 ntBASIC15.71■□□□□ 0.11
UBQLN3Q9H347 KRT18P58-201ENST00000527480 1120 ntBASIC15.71■□□□□ 0.11
UBQLN3Q9H347 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN3Q9H347 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms