Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN18Q99952 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN18Q99952 FRMD8P1-201ENST00000440433 1524 ntBASIC19.17■□□□□ 0.66
PTPN18Q99952 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN18Q99952 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN18Q99952 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PTPN18Q99952 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PTPN18Q99952 TMEM14DP-201ENST00000422205 345 ntBASIC19.17■□□□□ 0.66
PTPN18Q99952 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
PTPN18Q99952 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PTPN18Q99952 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.17■□□□□ 0.66
PTPN18Q99952 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 AC092552.1-201ENST00000547243 906 ntBASIC19.17■□□□□ 0.66
PTPN18Q99952 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
PTPN18Q99952 CTBP2P3-201ENST00000585629 1255 ntBASIC19.17■□□□□ 0.66
PTPN18Q99952 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN18Q99952 AC084346.2-201ENST00000607097 949 ntBASIC19.17■□□□□ 0.66
PTPN18Q99952 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PTPN18Q99952 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN18Q99952 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN18Q99952 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PTPN18Q99952 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PTPN18Q99952 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 AC133963.1-201ENST00000504166 1679 ntBASIC19.17■□□□□ 0.66
PTPN18Q99952 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN18Q99952 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN18Q99952 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN18Q99952 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PTPN18Q99952 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN18Q99952 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN18Q99952 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 REXO1L6P-201ENST00000603433 1515 ntBASIC19.16■□□□□ 0.66
PTPN18Q99952 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN18Q99952 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN18Q99952 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN18Q99952 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN18Q99952 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN18Q99952 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PTPN18Q99952 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN18Q99952 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PTPN18Q99952 AC114501.2-201ENST00000439631 535 ntBASIC19.16■□□□□ 0.66
PTPN18Q99952 TTTY23B-201ENST00000442790 549 ntBASIC19.16■□□□□ 0.66
PTPN18Q99952 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.16■□□□□ 0.66
PTPN18Q99952 RN7SL618P-201ENST00000477850 296 ntBASIC19.16■□□□□ 0.66
PTPN18Q99952 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN18Q99952 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.16■□□□□ 0.66
PTPN18Q99952 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.16■□□□□ 0.66
PTPN18Q99952 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.16■□□□□ 0.66
PTPN18Q99952 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN18Q99952 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN18Q99952 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN18Q99952 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PTPN18Q99952 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN18Q99952 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
PTPN18Q99952 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN18Q99952 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN18Q99952 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN18Q99952 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN18Q99952 AC093525.9-201ENST00000624961 1746 ntBASIC19.15■□□□□ 0.66
PTPN18Q99952 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN18Q99952 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTPN18Q99952 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN18Q99952 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN18Q99952 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN18Q99952 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN18Q99952 RNA5SP410-201ENST00000516285 106 ntBASIC19.15■□□□□ 0.66
PTPN18Q99952 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.15■□□□□ 0.66
PTPN18Q99952 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTPN18Q99952 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PTPN18Q99952 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PTPN18Q99952 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN18Q99952 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN18Q99952 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms