Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARID3AQ99856 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARID3AQ99856 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
ARID3AQ99856 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.38■□□□□ 0.69
ARID3AQ99856 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ARID3AQ99856 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.38■□□□□ 0.69
ARID3AQ99856 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ARID3AQ99856 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.38■□□□□ 0.69
ARID3AQ99856 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ARID3AQ99856 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.38■□□□□ 0.69
ARID3AQ99856 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.38■□□□□ 0.69
ARID3AQ99856 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.38■□□□□ 0.69
ARID3AQ99856 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.38■□□□□ 0.69
ARID3AQ99856 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.38■□□□□ 0.69
ARID3AQ99856 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
ARID3AQ99856 AC005332.3-201ENST00000589904 676 ntBASIC19.38■□□□□ 0.69
ARID3AQ99856 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.38■□□□□ 0.69
ARID3AQ99856 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ARID3AQ99856 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.38■□□□□ 0.69
ARID3AQ99856 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
ARID3AQ99856 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
ARID3AQ99856 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.38■□□□□ 0.69
ARID3AQ99856 Z83836.1-201ENST00000624605 1642 ntBASIC19.38■□□□□ 0.69
ARID3AQ99856 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ARID3AQ99856 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ARID3AQ99856 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ARID3AQ99856 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARID3AQ99856 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ARID3AQ99856 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ARID3AQ99856 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ARID3AQ99856 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.37■□□□□ 0.69
ARID3AQ99856 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.37■□□□□ 0.69
ARID3AQ99856 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.37■□□□□ 0.69
ARID3AQ99856 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.37■□□□□ 0.69
ARID3AQ99856 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.37■□□□□ 0.69
ARID3AQ99856 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ARID3AQ99856 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.37■□□□□ 0.69
ARID3AQ99856 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.37■□□□□ 0.69
ARID3AQ99856 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.37■□□□□ 0.69
ARID3AQ99856 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.37■□□□□ 0.69
ARID3AQ99856 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.37■□□□□ 0.69
ARID3AQ99856 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.37■□□□□ 0.69
ARID3AQ99856 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 FAM86EP-206ENST00000510506 987 ntBASIC19.37■□□□□ 0.69
ARID3AQ99856 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
ARID3AQ99856 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.37■□□□□ 0.69
ARID3AQ99856 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.37■□□□□ 0.69
ARID3AQ99856 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.37■□□□□ 0.69
ARID3AQ99856 AC008687.5-201ENST00000593746 558 ntBASIC19.37■□□□□ 0.69
ARID3AQ99856 AL390719.2-201ENST00000606993 987 ntBASIC19.37■□□□□ 0.69
ARID3AQ99856 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.37■□□□□ 0.69
ARID3AQ99856 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ARID3AQ99856 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
ARID3AQ99856 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARID3AQ99856 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
ARID3AQ99856 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
ARID3AQ99856 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.36■□□□□ 0.69
ARID3AQ99856 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARID3AQ99856 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARID3AQ99856 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARID3AQ99856 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARID3AQ99856 C1R-202ENST00000536053 2347 ntTSL 2 BASIC19.36■□□□□ 0.69
ARID3AQ99856 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
ARID3AQ99856 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARID3AQ99856 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARID3AQ99856 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.36■□□□□ 0.69
ARID3AQ99856 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARID3AQ99856 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARID3AQ99856 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms