Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC055876.3-201ENST00000431496 288 ntBASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 AC004890.2-204ENST00000481968 304 ntBASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 RNA5SP410-201ENST00000516285 106 ntBASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 AC138649.4-201ENST00000612222 287 ntBASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 PCDHB18P-201ENST00000524813 2368 ntBASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 AC097493.3-201ENST00000509725 367 ntBASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 MIR3197-201ENST00000582241 73 ntBASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 AL138828.2-201ENST00000615812 383 ntBASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 AP001094.4-201ENST00000579008 2176 ntBASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 AC078925.2-201ENST00000624013 1973 ntBASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 SPDYE12P-201ENST00000618416 771 ntBASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDK5RAP2Q96SN8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 AC004790.1-201ENST00000612686 536 ntBASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 AP002490.2-201ENST00000524791 560 ntBASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 AC061975.2-201ENST00000581722 295 ntBASIC19.67■□□□□ 0.74
CDK5RAP2Q96SN8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms