Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 RNU1-129P-201ENST00000384064 167 ntBASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 AC092474.2-201ENST00000424288 719 ntBASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 GPS2P2-201ENST00000430745 888 ntBASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 RN7SL589P-201ENST00000481268 310 ntBASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 U1.21-201ENST00000580816 167 ntBASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 MPDU1-223ENST00000582151 728 ntBASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 AC131009.4-201ENST00000624048 1740 ntBASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 AC141586.5-201ENST00000624546 2050 ntBASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85AQ96PX6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 RBPMS2P1-201ENST00000437762 623 ntBASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 FAM86GP-201ENST00000448322 971 ntBASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 AL390955.2-201ENST00000603032 514 ntBASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 AL161645.1-201ENST00000622716 1255 ntBASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 AC092068.3-201ENST00000587894 2016 ntBASIC20.94■□□□□ 0.94
CCDC85AQ96PX6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 FAM8A3P-201ENST00000427218 844 ntBASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 IGHV3-62-201ENST00000520057 340 ntBASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 LINC01225-203ENST00000563550 1244 ntBASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC85AQ96PX6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms