Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 AC107918.2-201ENST00000530817 355 ntBASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC46A1Q96NT5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 AC125807.1-201ENST00000483097 614 ntBASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 AC005225.4-201ENST00000557330 545 ntBASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 AC140878.1-201ENST00000565277 250 ntBASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A1Q96NT5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 SPCS2P4-201ENST00000436160 681 ntBASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 FAM207CP-201ENST00000443486 507 ntBASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 IGHV3-62-201ENST00000520057 340 ntBASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 KRT8P23-201ENST00000560090 1207 ntBASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 AC012645.4-201ENST00000610691 1061 ntBASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms