Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AC211429.1-201ENST00000415277 523 ntBASIC14.8□□□□□ -0.04
CPNE2Q96FN4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 BX276092.5-203ENST00000456199 560 ntBASIC14.8□□□□□ -0.04
CPNE2Q96FN4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 AC007326.2-201ENST00000624224 7579 ntBASIC14.8□□□□□ -0.04
CPNE2Q96FN4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE2Q96FN4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 AC005336.2-201ENST00000593183 939 ntBASIC14.79□□□□□ -0.04
CPNE2Q96FN4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE2Q96FN4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 AL135999.2-201ENST00000622438 1686 ntBASIC14.78□□□□□ -0.04
CPNE2Q96FN4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 AC067930.6-201ENST00000623257 4947 ntBASIC14.78□□□□□ -0.04
CPNE2Q96FN4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 AC092850.2-201ENST00000623821 2697 ntBASIC14.78□□□□□ -0.04
CPNE2Q96FN4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 CHCHD2P8-201ENST00000429873 447 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms