Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RNF34Q969K3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF34Q969K3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF34Q969K3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF34Q969K3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF34Q969K3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF34Q969K3 AC009947.1-201ENST00000444350 727 ntBASIC17.75■□□□□ 0.43
RNF34Q969K3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF34Q969K3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF34Q969K3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF34Q969K3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.75■□□□□ 0.43
RNF34Q969K3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF34Q969K3 FRMD8P1-201ENST00000440433 1524 ntBASIC17.75■□□□□ 0.43
RNF34Q969K3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF34Q969K3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.75■□□□□ 0.43
RNF34Q969K3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RNF34Q969K3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF34Q969K3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF34Q969K3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF34Q969K3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
RNF34Q969K3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF34Q969K3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RNF34Q969K3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF34Q969K3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF34Q969K3 CRYGEP-201ENST00000412192 528 ntBASIC17.74■□□□□ 0.43
RNF34Q969K3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF34Q969K3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF34Q969K3 SLC25A1P1-201ENST00000528351 927 ntBASIC17.74■□□□□ 0.43
RNF34Q969K3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF34Q969K3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF34Q969K3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF34Q969K3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF34Q969K3 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF34Q969K3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF34Q969K3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF34Q969K3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF34Q969K3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF34Q969K3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF34Q969K3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF34Q969K3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF34Q969K3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF34Q969K3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF34Q969K3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 LTB4R2-202ENST00000528054 3092 ntBASIC17.73■□□□□ 0.43
RNF34Q969K3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RNF34Q969K3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF34Q969K3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF34Q969K3 PAWRP1-201ENST00000451083 565 ntBASIC17.73■□□□□ 0.43
RNF34Q969K3 AC087163.2-201ENST00000457299 853 ntBASIC17.73■□□□□ 0.43
RNF34Q969K3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF34Q969K3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF34Q969K3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RNF34Q969K3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF34Q969K3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF34Q969K3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF34Q969K3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF34Q969K3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF34Q969K3 AC092068.3-201ENST00000587894 2016 ntBASIC17.72■□□□□ 0.43
RNF34Q969K3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF34Q969K3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF34Q969K3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF34Q969K3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF34Q969K3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF34Q969K3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF34Q969K3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF34Q969K3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RNF34Q969K3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF34Q969K3 MIR940-201ENST00000401276 94 ntBASIC17.72■□□□□ 0.43
RNF34Q969K3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF34Q969K3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms