Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 AC018712.1-201ENST00000455767 687 ntBASIC17.43■□□□□ 0.38
SCG3Q8WXD2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 RNA5SP419-201ENST00000515908 135 ntBASIC17.43■□□□□ 0.38
SCG3Q8WXD2 AC139887.3-201ENST00000568585 713 ntBASIC17.43■□□□□ 0.38
SCG3Q8WXD2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 AC148477.8-201ENST00000624298 468 ntBASIC17.43■□□□□ 0.38
SCG3Q8WXD2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 LINC02199-201ENST00000506655 2702 ntBASIC17.42■□□□□ 0.38
SCG3Q8WXD2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 AC109462.3-201ENST00000573934 613 ntBASIC17.42■□□□□ 0.38
SCG3Q8WXD2 STK25P1-201ENST00000585406 838 ntBASIC17.42■□□□□ 0.38
SCG3Q8WXD2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 AL139288.1-201ENST00000623748 933 ntBASIC17.42■□□□□ 0.38
SCG3Q8WXD2 AF228730.7-201ENST00000641842 219 ntBASIC17.42■□□□□ 0.38
SCG3Q8WXD2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 AC103702.1-201ENST00000548801 2630 ntBASIC17.42■□□□□ 0.38
SCG3Q8WXD2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.42■□□□□ 0.38
SCG3Q8WXD2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 AGGF1P2-201ENST00000426656 2106 ntBASIC17.41■□□□□ 0.38
SCG3Q8WXD2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 AC106886.4-201ENST00000623557 2502 ntBASIC17.41■□□□□ 0.38
SCG3Q8WXD2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCG3Q8WXD2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms