Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 TSPY19P-201ENST00000418461 509 ntBASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 TSPY18P-201ENST00000441642 509 ntBASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 AC008608.2-201ENST00000606089 416 ntBASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 PCDHA14-201ENST00000506751 2298 ntBASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 AL355877.3-201ENST00000622820 899 ntBASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 AC078925.2-201ENST00000624013 1973 ntBASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP1Q8TDR0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 AL021920.2-201ENST00000624828 1351 ntBASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 SCARNA2-201ENST00000458748 420 ntBASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 AC064862.7-201ENST00000604520 867 ntBASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 AL353135.1-201ENST00000606729 504 ntBASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 PCDHB17P-201ENST00000539533 2393 ntBASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAF3IP1Q8TDR0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms