Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 AC006058.4-201ENST00000624016 1670 ntBASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM11BQ8TCY0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 TNRC18P2-201ENST00000417666 2714 ntBASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AC026366.1-201ENST00000488803 879 ntBASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AL603832.2-201ENST00000566195 2125 ntBASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AL596087.1-201ENST00000400979 1969 ntBASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AC010491.1-201ENST00000563101 2797 ntBASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms