Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 AC007967.3-201ENST00000434308 558 ntBASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IL1Q8TBN0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.96■□□□□ 0.3
RAB3IL1Q8TBN0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.96■□□□□ 0.3
RAB3IL1Q8TBN0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
RAB3IL1Q8TBN0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RAB3IL1Q8TBN0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 RCN1P1-201ENST00000400413 996 ntBASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 AC103564.2-201ENST00000432853 1299 ntBASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 STK25P1-201ENST00000585406 838 ntBASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 AC010331.1-201ENST00000611423 582 ntBASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 AL138966.2-201ENST00000621997 464 ntBASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 AL031432.5-201ENST00000641059 760 ntBASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB3IL1Q8TBN0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 AL049757.1-201ENST00000616842 1596 ntBASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 MIR662-201ENST00000384847 95 ntBASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 ZNF444P1-201ENST00000559497 298 ntBASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 AL391256.1-201ENST00000443260 1855 ntBASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms