Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 TERC-201ENST00000602385 541 ntBASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 AC064862.7-201ENST00000604520 867 ntBASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 AL645728.1-201ENST00000366221 2101 ntBASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 AC091304.2-201ENST00000564639 760 ntBASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 REXO1L6P-202ENST00000619970 1078 ntBASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.55■□□□□ 0.08
LSMEM1Q8N8F7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 AC243591.1-201ENST00000452967 1364 ntBASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms