Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 SLC25A6P2-201ENST00000497974 877 ntBASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 NKILA-202ENST00000614771 2598 ntBASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 TOP3BP1-201ENST00000420768 1380 ntBASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 MRPL20P1-201ENST00000400819 433 ntBASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 AC108751.1-201ENST00000490852 363 ntBASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 AC079776.4-201ENST00000511039 504 ntBASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATPAF2Q8N5M1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 MIR4751-201ENST00000578027 74 ntBASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 AC011676.5-201ENST00000624864 2660 ntBASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms