Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 AC009947.1-201ENST00000444350 727 ntBASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 AC004790.2-201ENST00000623588 572 ntBASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 AC104109.2-201ENST00000602919 1418 ntBASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB42Q8N4Z0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 AC145285.3-201ENST00000564603 959 ntBASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 KRT8P49-201ENST00000604166 1432 ntBASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 TOP3BP1-201ENST00000420768 1380 ntBASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 AC092053.1-201ENST00000605787 1936 ntBASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB42Q8N4Z0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 AC106820.2-201ENST00000563775 3264 ntBASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 AC002310.6-201ENST00000624451 1377 ntBASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 AL121761.2-201ENST00000598007 1648 ntBASIC16.48■□□□□ 0.23
RAB42Q8N4Z0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms