Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VPS8Q8N3P4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 KRT18P32-201ENST00000424695 1287 ntBASIC26.23■■□□□ 1.79
VPS8Q8N3P4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 AP000842.3-202ENST00000569238 1080 ntBASIC26.23■■□□□ 1.79
VPS8Q8N3P4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 AC008267.7-201ENST00000624570 1194 ntBASIC26.23■■□□□ 1.79
VPS8Q8N3P4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 AC006538.1-201ENST00000567905 1585 ntBASIC26.23■■□□□ 1.79
VPS8Q8N3P4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VPS8Q8N3P4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 AC026471.1-201ENST00000564629 3026 ntBASIC26.22■■□□□ 1.79
VPS8Q8N3P4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 AL592309.1-201ENST00000443127 649 ntBASIC26.22■■□□□ 1.79
VPS8Q8N3P4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC26.22■■□□□ 1.79
VPS8Q8N3P4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 LBH-203ENST00000404397 543 ntTSL 4 BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 KRT8P23-201ENST00000560090 1207 ntBASIC26.21■■□□□ 1.79
VPS8Q8N3P4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS8Q8N3P4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
VPS8Q8N3P4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
VPS8Q8N3P4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
VPS8Q8N3P4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
VPS8Q8N3P4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 AC109322.1-201ENST00000524499 1264 ntBASIC26.2■■□□□ 1.78
VPS8Q8N3P4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 GPAA1P2-202ENST00000606848 1787 ntBASIC26.2■■□□□ 1.78
VPS8Q8N3P4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC26.2■■□□□ 1.78
VPS8Q8N3P4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms