Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 AL020989.1-201ENST00000422979 469 ntBASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 AL845331.1-201ENST00000424978 1190 ntBASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 KRT8P49-201ENST00000604166 1432 ntBASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LINC01561Q8N1V8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 SPDYE13P-201ENST00000445314 798 ntBASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms