Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 AC092580.3-201ENST00000430932 139 ntBASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 HLA-J-202ENST00000469281 1241 ntBASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 AP000842.3-202ENST00000569238 1080 ntBASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEFF1Q8IYR6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEFF1Q8IYR6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEFF1Q8IYR6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEFF1Q8IYR6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TMEFF1Q8IYR6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
TMEFF1Q8IYR6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEFF1Q8IYR6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEFF1Q8IYR6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEFF1Q8IYR6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEFF1Q8IYR6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEFF1Q8IYR6 AC005332.8-201ENST00000622750 2735 ntBASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 HCG4-201ENST00000418983 998 ntBASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 AL031055.1-201ENST00000606362 631 ntBASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TMEFF1Q8IYR6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 RNU1-129P-201ENST00000384064 167 ntBASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 U1.21-201ENST00000580816 167 ntBASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms