Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AL603832.2-201ENST00000566195 2125 ntBASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 AC073195.1-201ENST00000607241 877 ntBASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
CROCCP3Q8IVE0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 MFAP1P1-201ENST00000442257 1255 ntBASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 AL355355.2-201ENST00000442321 338 ntBASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 WWOX-216ENST00000569818 525 ntBASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 AC112497.1-201ENST00000624824 639 ntBASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 OR2I1P-210ENST00000642037 4691 ntBASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP3Q8IVE0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 SBF1P1-201ENST00000444527 5631 ntBASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 LINC00167-201ENST00000530583 1419 ntBASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 AC005104.2-201ENST00000427818 678 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms