Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
NPAS4Q8IUM7 AC027307.3-201ENST00000594262 1100 ntBASIC18.02■□□□□ 0.48
NPAS4Q8IUM7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.02■□□□□ 0.48
NPAS4Q8IUM7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
NPAS4Q8IUM7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
NPAS4Q8IUM7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.02■□□□□ 0.47
NPAS4Q8IUM7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NPAS4Q8IUM7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 HLA-H-201ENST00000383620 1096 ntBASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 PRYP6-201ENST00000514804 343 ntBASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 AL358472.5-202ENST00000641448 1267 ntBASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
NPAS4Q8IUM7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 HLA-V-204ENST00000476601 1289 ntBASIC18■□□□□ 0.47
NPAS4Q8IUM7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 AP005018.1-201ENST00000525475 301 ntBASIC18■□□□□ 0.47
NPAS4Q8IUM7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 AL138828.2-201ENST00000615812 383 ntBASIC18■□□□□ 0.47
NPAS4Q8IUM7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18■□□□□ 0.47
NPAS4Q8IUM7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 AC022144.1-201ENST00000602255 1580 ntBASIC18■□□□□ 0.47
NPAS4Q8IUM7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPAS4Q8IUM7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 AC108860.2-201ENST00000562760 2183 ntBASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 PIN1P1-201ENST00000412108 996 ntBASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 NOC2LP1-202ENST00000452600 2235 ntBASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPAS4Q8IUM7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms