Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 AC131009.4-201ENST00000624048 1740 ntBASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 RNA5SP423-201ENST00000517127 109 ntBASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 AL844908.2-201ENST00000609461 460 ntBASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 FAM86MP-201ENST00000340703 885 ntBASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 ZNF767P-206ENST00000513792 565 ntBASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 AL109936.8-201ENST00000641772 604 ntBASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 CROCCP2-202ENST00000412962 2773 ntBASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 CTBP2P3-201ENST00000585629 1255 ntBASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 AC003101.2-201ENST00000612557 442 ntBASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 MIR6775-201ENST00000617557 69 ntBASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 AC022210.1-201ENST00000449856 793 ntBASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 AC135586.1-201ENST00000539323 574 ntBASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13BQ7Z7G8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 AC093525.9-201ENST00000624961 1746 ntBASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms