Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 KRT18P56-201ENST00000507275 550 ntBASIC15.7■□□□□ 0.1
TUBA1AQ71U36 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 AC011840.4-201ENST00000578471 627 ntBASIC15.7■□□□□ 0.1
TUBA1AQ71U36 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.7■□□□□ 0.1
TUBA1AQ71U36 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.7■□□□□ 0.1
TUBA1AQ71U36 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBA1AQ71U36 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 AC078925.2-201ENST00000624013 1973 ntBASIC15.69■□□□□ 0.1
TUBA1AQ71U36 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 DRAXINP1-201ENST00000437611 948 ntBASIC15.69■□□□□ 0.1
TUBA1AQ71U36 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 AP005901.3-202ENST00000581653 237 ntBASIC15.69■□□□□ 0.1
TUBA1AQ71U36 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 AC233702.3-201ENST00000578656 1387 ntBASIC15.69■□□□□ 0.1
TUBA1AQ71U36 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 AC024909.3-201ENST00000611513 2257 ntBASIC15.69■□□□□ 0.1
TUBA1AQ71U36 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1AQ71U36 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 LINC02012-201ENST00000608206 1725 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms