Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 AD001527.2-201ENST00000622994 785 ntBASIC17.09■□□□□ 0.33
RAPH1Q70E73 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAPH1Q70E73 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
RAPH1Q70E73 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAPH1Q70E73 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAPH1Q70E73 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAPH1Q70E73 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAPH1Q70E73 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RAPH1Q70E73 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.08■□□□□ 0.33
RAPH1Q70E73 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAPH1Q70E73 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RAPH1Q70E73 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 FRMD8P1-201ENST00000440433 1524 ntBASIC17.08■□□□□ 0.32
RAPH1Q70E73 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 AC233702.3-201ENST00000578656 1387 ntBASIC17.08■□□□□ 0.32
RAPH1Q70E73 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 TSSC2-201ENST00000450217 709 ntBASIC17.08■□□□□ 0.32
RAPH1Q70E73 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 AL049597.2-201ENST00000565575 961 ntBASIC17.08■□□□□ 0.32
RAPH1Q70E73 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
RAPH1Q70E73 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAPH1Q70E73 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
RAPH1Q70E73 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAPH1Q70E73 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.07■□□□□ 0.32
RAPH1Q70E73 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAPH1Q70E73 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.07■□□□□ 0.32
RAPH1Q70E73 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.07■□□□□ 0.32
RAPH1Q70E73 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAPH1Q70E73 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAPH1Q70E73 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms