Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP4Q6PIL6 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 KRT18P29-201ENST00000397031 1267 ntBASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 C1QBPP2-201ENST00000528754 825 ntBASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 AC008403.3-201ENST00000598924 454 ntBASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
KCNIP4Q6PIL6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.16□□□□□ -0.3
KCNIP4Q6PIL6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP4Q6PIL6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP4Q6PIL6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP4Q6PIL6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.16□□□□□ -0.3
KCNIP4Q6PIL6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
KCNIP4Q6PIL6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
KCNIP4Q6PIL6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.16□□□□□ -0.3
KCNIP4Q6PIL6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms