Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 STK19B-204ENST00000512515 211 ntBASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 AC133561.5-201ENST00000635547 218 ntBASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 AL049757.1-201ENST00000616842 1596 ntBASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.4■□□□□ 0.06
LCN1P1Q5VSP4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AC003669.1-201ENST00000334569 611 ntBASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AK4P3-201ENST00000418260 669 ntBASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AL138831.2-201ENST00000606564 490 ntBASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AL592071.1-201ENST00000611956 408 ntBASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 GPR89P-201ENST00000407924 1495 ntBASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 AC126755.1-201ENST00000525846 6405 ntBASIC15.39■□□□□ 0.05
LCN1P1Q5VSP4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LCN1P1Q5VSP4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LCN1P1Q5VSP4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LCN1P1Q5VSP4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms