Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13DQ5THJ4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 GPR182-203ENST00000622922 591 ntBASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.21□□□□□ -0.62
VPS13DQ5THJ4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 KRT17P7-201ENST00000451704 1104 ntBASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 RN7SL752P-201ENST00000463779 287 ntBASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 RN7SL618P-201ENST00000477850 296 ntBASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 USP32P1-208ENST00000506594 1164 ntBASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13DQ5THJ4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 AC098614.1-201ENST00000368528 745 ntBASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 AC098859.1-201ENST00000502915 1238 ntBASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 AL512638.1-201ENST00000457493 794 ntBASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 DOC2GP-202ENST00000514950 1163 ntBASIC11.19□□□□□ -0.62
VPS13DQ5THJ4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms